Package index

Build relatedness matrices

Compute measures, account for what ran, and convert between types.

precise_dist()

Build many relatedness matrices from one data set

precise_dist_list()

List the registered measures precise_dist() accepts

precise_func_fact()

Build a family of measures that differ by one parameter

precise_run_report()

Retrieve the per-measure run ledger

precise_read()

Read a run saved by precise_dist()

precise_transform()

Convert and rescale relatedness matrices

pd_convertible_to_distance()

Check whether a measure has a defined distance conversion

Compare and combine

Summarize matrices, measure agreement, fuse them, and project a graph.

precise_diagnostics()

Scalar diagnostics for relatedness matrices

precise_correlations()

Measure pairwise agreement between relatedness matrices

precise_fusion()

Combine several relatedness matrices into one consensus matrix

precise_stability()

Fuse resampled subsets of relatedness matrices

precise_graph()

Turn relatedness matrices into graph matrices

Helpers

pd_diagonal()

Replace the diagonal of a square matrix

`%>%`

Pipe operator

Data

The example data set used throughout the reference pages and guides.

data_cell_cycle

Processed single-cell RNA-seq cell-cycle data